Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc4Q08624 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc4Q08624 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc4Q08624 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc4Q08624 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc4Q08624 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 BC037039-201ENSMUST00000192003 2205 ntBASIC14.33□□□□□ -0.12
Hoxc4Q08624 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Olfr286-202ENSMUST00000205305 969 ntBASIC14.33□□□□□ -0.12
Hoxc4Q08624 Gm9182-201ENSMUST00000217829 639 ntBASIC14.33□□□□□ -0.12
Hoxc4Q08624 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc4Q08624 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.32□□□□□ -0.12
Hoxc4Q08624 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.32□□□□□ -0.12
Hoxc4Q08624 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Gm27618-201ENSMUST00000183671 60 ntBASIC14.32□□□□□ -0.12
Hoxc4Q08624 Gm28630-201ENSMUST00000187806 498 ntBASIC14.32□□□□□ -0.12
Hoxc4Q08624 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.32□□□□□ -0.12
Hoxc4Q08624 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms