Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.46□□□□□ -0.41
Tff1Q08423 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.46□□□□□ -0.41
Tff1Q08423 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.46□□□□□ -0.41
Tff1Q08423 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Tff1Q08423 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Tff1Q08423 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.42
Tff1Q08423 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tff1Q08423 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Gm6736-201ENSMUST00000166583 948 ntBASIC12.45□□□□□ -0.42
Tff1Q08423 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.45□□□□□ -0.42
Tff1Q08423 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.45□□□□□ -0.42
Tff1Q08423 Gm27702-201ENSMUST00000184512 56 ntBASIC12.45□□□□□ -0.42
Tff1Q08423 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Gm18622-201ENSMUST00000219361 595 ntBASIC12.45□□□□□ -0.42
Tff1Q08423 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tff1Q08423 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tff1Q08423 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tff1Q08423 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm12350-201ENSMUST00000121208 462 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.44□□□□□ -0.42
Tff1Q08423 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.44□□□□□ -0.42
Tff1Q08423 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Tff1Q08423 Gm5264-201ENSMUST00000190584 848 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44357-201ENSMUST00000195897 142 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm19658-201ENSMUST00000196231 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44367-201ENSMUST00000196836 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44350-201ENSMUST00000197197 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44390-201ENSMUST00000197533 144 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44313-201ENSMUST00000198018 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44486-201ENSMUST00000198508 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44314-201ENSMUST00000199263 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44394-201ENSMUST00000199558 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44484-201ENSMUST00000199873 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44466-201ENSMUST00000200264 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm44359-201ENSMUST00000200671 138 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Gm9172-201ENSMUST00000212092 954 ntBASIC12.44□□□□□ -0.42
Tff1Q08423 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tff1Q08423 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms