Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf1Q07802 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ebf1Q07802 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf1Q07802 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf1Q07802 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf1Q07802 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.19■□□□□ 0.02
Ebf1Q07802 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Gm24158-201ENSMUST00000175263 71 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.18■□□□□ 0.02
Ebf1Q07802 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ebf1Q07802 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf1Q07802 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf1Q07802 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.17■□□□□ 0.02
Ebf1Q07802 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.17■□□□□ 0.02
Ebf1Q07802 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.17■□□□□ 0.02
Ebf1Q07802 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.17■□□□□ 0.02
Ebf1Q07802 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf1Q07802 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm14722-201ENSMUST00000118943 689 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm27622-201ENSMUST00000183779 60 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms