Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Gm6983-201ENSMUST00000214912 628 ntBASIC22.66■■□□□ 1.22
Col17a1Q07563 AC154806.6-201ENSMUST00000228192 202 ntBASIC22.66■■□□□ 1.22
Col17a1Q07563 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col17a1Q07563 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Col17a1Q07563 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Gm6203-201ENSMUST00000209575 1342 ntBASIC22.65■■□□□ 1.22
Col17a1Q07563 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Col17a1Q07563 Gm13689-201ENSMUST00000119360 685 ntBASIC22.65■■□□□ 1.22
Col17a1Q07563 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC22.65■■□□□ 1.22
Col17a1Q07563 AC154680.1-201ENSMUST00000224376 859 ntBASIC22.65■■□□□ 1.22
Col17a1Q07563 Gm14267-206ENSMUST00000226870 1209 ntBASIC22.65■■□□□ 1.22
Col17a1Q07563 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Snora73a-201ENSMUST00000082453 205 ntBASIC22.65■■□□□ 1.22
Col17a1Q07563 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Col17a1Q07563 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col17a1Q07563 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Col17a1Q07563 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col17a1Q07563 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col17a1Q07563 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col17a1Q07563 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col17a1Q07563 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col17a1Q07563 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.64■■□□□ 1.22
Col17a1Q07563 Gm15240-201ENSMUST00000118156 720 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm11524-201ENSMUST00000119349 807 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm1335-201ENSMUST00000121653 386 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm2991-201ENSMUST00000173338 480 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC22.64■■□□□ 1.21
Col17a1Q07563 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm6621-201ENSMUST00000193251 772 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 Gm29705-201ENSMUST00000212598 474 ntBASIC22.64■■□□□ 1.21
Col17a1Q07563 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col17a1Q07563 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Col17a1Q07563 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
Col17a1Q07563 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Gm13813-201ENSMUST00000120998 787 ntBASIC22.63■■□□□ 1.21
Col17a1Q07563 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Gm20482-202ENSMUST00000174729 825 ntBASIC22.63■■□□□ 1.21
Col17a1Q07563 Gm45186-201ENSMUST00000206874 478 ntBASIC22.63■■□□□ 1.21
Col17a1Q07563 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Col17a1Q07563 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col17a1Q07563 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm12416-201ENSMUST00000120911 1008 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Proscos-202ENSMUST00000178990 666 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm44985-201ENSMUST00000206202 1016 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm8227-201ENSMUST00000223306 571 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 AC139350.3-201ENSMUST00000226151 420 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Col17a1Q07563 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col17a1Q07563 Gm42900-201ENSMUST00000197184 2167 ntBASIC22.62■■□□□ 1.21
Col17a1Q07563 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm8810-201ENSMUST00000172895 754 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm4691-201ENSMUST00000182339 1000 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm37835-201ENSMUST00000193305 361 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm2451-201ENSMUST00000199447 999 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm10290-201ENSMUST00000200451 999 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm43338-201ENSMUST00000198617 2223 ntBASIC22.61■■□□□ 1.21
Col17a1Q07563 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col17a1Q07563 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms