Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcr5Q04683 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcr5Q04683 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gm27646-201ENSMUST00000183989 110 ntBASIC14.27□□□□□ -0.13
Cxcr5Q04683 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gm33142-201ENSMUST00000193913 867 ntBASIC14.27□□□□□ -0.13
Cxcr5Q04683 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcr5Q04683 Carlr-201ENSMUST00000181515 2574 ntBASIC14.27□□□□□ -0.13
Cxcr5Q04683 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Gm43767-201ENSMUST00000198933 381 ntBASIC14.26□□□□□ -0.13
Cxcr5Q04683 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Gm6296-201ENSMUST00000222599 943 ntBASIC14.26□□□□□ -0.13
Cxcr5Q04683 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.26□□□□□ -0.13
Cxcr5Q04683 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcr5Q04683 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.26□□□□□ -0.13
Cxcr5Q04683 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.25□□□□□ -0.13
Cxcr5Q04683 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Gm23547-201ENSMUST00000158210 271 ntBASIC14.25□□□□□ -0.13
Cxcr5Q04683 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.25□□□□□ -0.13
Cxcr5Q04683 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.25□□□□□ -0.13
Cxcr5Q04683 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms