Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
Col6a2Q02788 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a2Q02788 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a2Q02788 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Col6a2Q02788 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.94□□□□□ -0.02
Col6a2Q02788 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a2Q02788 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a2Q02788 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col6a2Q02788 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.92□□□□□ -0.02
Col6a2Q02788 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Gm18889-201ENSMUST00000174284 929 ntBASIC14.92□□□□□ -0.02
Col6a2Q02788 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col6a2Q02788 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.92□□□□□ -0.02
Col6a2Q02788 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.92□□□□□ -0.02
Col6a2Q02788 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a2Q02788 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.91□□□□□ -0.02
Col6a2Q02788 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm16026-204ENSMUST00000162652 683 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms