Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Gm15824-201ENSMUST00000119516 955 ntBASIC21■□□□□ 0.95
Xrn1P97789 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Xrn1P97789 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC21■□□□□ 0.95
Xrn1P97789 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC21■□□□□ 0.95
Xrn1P97789 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Xrn1P97789 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC21■□□□□ 0.95
Xrn1P97789 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Xrn1P97789 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Xrn1P97789 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Xrn1P97789 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.98■□□□□ 0.95
Xrn1P97789 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.98■□□□□ 0.95
Xrn1P97789 Gm8062-201ENSMUST00000139696 444 ntBASIC20.98■□□□□ 0.95
Xrn1P97789 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Xrn1P97789 AC154806.6-201ENSMUST00000228192 202 ntBASIC20.98■□□□□ 0.95
Xrn1P97789 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Xrn1P97789 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Xrn1P97789 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.98■□□□□ 0.95
Xrn1P97789 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.98■□□□□ 0.95
Xrn1P97789 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Xrn1P97789 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.97■□□□□ 0.95
Xrn1P97789 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Xrn1P97789 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.97■□□□□ 0.95
Xrn1P97789 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Xrn1P97789 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Xrn1P97789 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.96■□□□□ 0.95
Xrn1P97789 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Xrn1P97789 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.96■□□□□ 0.95
Xrn1P97789 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.96■□□□□ 0.95
Xrn1P97789 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.96■□□□□ 0.95
Xrn1P97789 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Xrn1P97789 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Xrn1P97789 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Xrn1P97789 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.95■□□□□ 0.94
Xrn1P97789 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Xrn1P97789 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Xrn1P97789 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Xrn1P97789 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.95■□□□□ 0.94
Xrn1P97789 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Xrn1P97789 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Xrn1P97789 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Xrn1P97789 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Xrn1P97789 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Xrn1P97789 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms