Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcc1P97496 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcc1P97496 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
Smarcc1P97496 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Smarcc1P97496 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcc1P97496 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smarcc1P97496 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcc1P97496 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcc1P97496 Gm12091-201ENSMUST00000146791 830 ntBASIC18.64■□□□□ 0.57
Smarcc1P97496 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcc1P97496 Gm42612-201ENSMUST00000197986 623 ntBASIC18.64■□□□□ 0.57
Smarcc1P97496 Gm43170-201ENSMUST00000199827 612 ntBASIC18.64■□□□□ 0.57
Smarcc1P97496 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcc1P97496 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc1P97496 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Gm15653-201ENSMUST00000119247 907 ntBASIC18.63■□□□□ 0.57
Smarcc1P97496 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.63■□□□□ 0.57
Smarcc1P97496 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.63■□□□□ 0.57
Smarcc1P97496 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.63■□□□□ 0.57
Smarcc1P97496 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.63■□□□□ 0.57
Smarcc1P97496 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcc1P97496 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc1P97496 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smarcc1P97496 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc1P97496 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Gm18018-201ENSMUST00000198273 408 ntBASIC18.62■□□□□ 0.57
Smarcc1P97496 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Gm9908-201ENSMUST00000211534 448 ntBASIC18.62■□□□□ 0.57
Smarcc1P97496 Gm16476-201ENSMUST00000221544 139 ntBASIC18.62■□□□□ 0.57
Smarcc1P97496 Dupd1-202ENSMUST00000224735 548 ntBASIC18.62■□□□□ 0.57
Smarcc1P97496 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcc1P97496 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcc1P97496 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms