Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.18□□□□□ -0.3
Hist1h3bP84228 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.18□□□□□ -0.3
Hist1h3bP84228 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.18□□□□□ -0.3
Hist1h3bP84228 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3bP84228 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3bP84228 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Gm45167-201ENSMUST00000208007 322 ntBASIC13.17□□□□□ -0.3
Hist1h3bP84228 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Gm7787-201ENSMUST00000216858 688 ntBASIC13.17□□□□□ -0.3
Hist1h3bP84228 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3bP84228 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.16□□□□□ -0.3
Hist1h3bP84228 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hist1h3bP84228 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.15□□□□□ -0.3
Hist1h3bP84228 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.15□□□□□ -0.3
Hist1h3bP84228 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms