Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm37722-201ENSMUST00000193757 208 ntBASIC12.59□□□□□ -0.39
SgcaP82350 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.59□□□□□ -0.39
SgcaP82350 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.59□□□□□ -0.39
SgcaP82350 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.59□□□□□ -0.39
SgcaP82350 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.59□□□□□ -0.39
SgcaP82350 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SgcaP82350 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.59□□□□□ -0.39
SgcaP82350 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SgcaP82350 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcaP82350 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SgcaP82350 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SgcaP82350 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
SgcaP82350 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SgcaP82350 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SgcaP82350 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SgcaP82350 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SgcaP82350 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.58□□□□□ -0.4
SgcaP82350 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SgcaP82350 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 Mir5130-201ENSMUST00000175160 84 ntBASIC12.58□□□□□ -0.4
SgcaP82350 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.58□□□□□ -0.4
SgcaP82350 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcaP82350 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.58□□□□□ -0.4
SgcaP82350 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SgcaP82350 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcaP82350 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SgcaP82350 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SgcaP82350 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.57□□□□□ -0.4
SgcaP82350 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.57□□□□□ -0.4
SgcaP82350 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.57□□□□□ -0.4
SgcaP82350 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.57□□□□□ -0.4
SgcaP82350 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SgcaP82350 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.57□□□□□ -0.4
SgcaP82350 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SgcaP82350 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcaP82350 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms