Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CiitaP79621 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Gm15920-201ENSMUST00000118998 402 ntBASIC16.21■□□□□ 0.19
CiitaP79621 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.21■□□□□ 0.19
CiitaP79621 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
CiitaP79621 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Gm18737-201ENSMUST00000173594 937 ntBASIC16.21■□□□□ 0.19
CiitaP79621 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.21■□□□□ 0.19
CiitaP79621 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
CiitaP79621 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.21■□□□□ 0.19
CiitaP79621 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CiitaP79621 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.21■□□□□ 0.19
CiitaP79621 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CiitaP79621 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CiitaP79621 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CiitaP79621 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.2■□□□□ 0.18
CiitaP79621 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CiitaP79621 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Gm11543-201ENSMUST00000120758 370 ntBASIC16.2■□□□□ 0.18
CiitaP79621 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.2■□□□□ 0.18
CiitaP79621 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.2■□□□□ 0.18
CiitaP79621 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.2■□□□□ 0.18
CiitaP79621 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CiitaP79621 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CiitaP79621 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CiitaP79621 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CiitaP79621 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
CiitaP79621 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CiitaP79621 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.19■□□□□ 0.18
CiitaP79621 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CiitaP79621 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.19■□□□□ 0.18
CiitaP79621 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.19■□□□□ 0.18
CiitaP79621 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CiitaP79621 Gm27920-201ENSMUST00000183953 96 ntBASIC16.19■□□□□ 0.18
CiitaP79621 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms