Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm1401-201ENSMUST00000122048 772 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm10499-201ENSMUST00000174094 934 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm4899-201ENSMUST00000178708 719 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm18206-201ENSMUST00000207027 926 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdlim4P70271 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.47□□□□□ -0.41
Pdlim4P70271 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pdlim4P70271 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.47□□□□□ -0.41
Pdlim4P70271 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.47□□□□□ -0.41
Pdlim4P70271 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.47□□□□□ -0.41
Pdlim4P70271 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.47□□□□□ -0.41
Pdlim4P70271 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.47□□□□□ -0.41
Pdlim4P70271 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.47□□□□□ -0.41
Pdlim4P70271 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim4P70271 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Pdlim4P70271 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Pdlim4P70271 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.46□□□□□ -0.41
Pdlim4P70271 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.46□□□□□ -0.41
Pdlim4P70271 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.46□□□□□ -0.41
Pdlim4P70271 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.46□□□□□ -0.41
Pdlim4P70271 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pdlim4P70271 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pdlim4P70271 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.46□□□□□ -0.41
Pdlim4P70271 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.46□□□□□ -0.41
Pdlim4P70271 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim4P70271 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim4P70271 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms