Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ThraP63058 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.19■□□□□ 0.02
ThraP63058 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.19■□□□□ 0.02
ThraP63058 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ThraP63058 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.18■□□□□ 0.02
ThraP63058 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Gm37153-201ENSMUST00000193637 231 ntBASIC15.18■□□□□ 0.02
ThraP63058 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.18■□□□□ 0.02
ThraP63058 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.18■□□□□ 0.02
ThraP63058 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.18■□□□□ 0.02
ThraP63058 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ThraP63058 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
ThraP63058 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.17■□□□□ 0.02
ThraP63058 Gm25911-201ENSMUST00000157621 56 ntBASIC15.17■□□□□ 0.02
ThraP63058 Mir3113-201ENSMUST00000175478 76 ntBASIC15.17■□□□□ 0.02
ThraP63058 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Mir8117-201ENSMUST00000184773 107 ntBASIC15.17■□□□□ 0.02
ThraP63058 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.17■□□□□ 0.02
ThraP63058 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ThraP63058 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ThraP63058 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.16■□□□□ 0.02
ThraP63058 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.16■□□□□ 0.02
ThraP63058 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.16■□□□□ 0.02
ThraP63058 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ThraP63058 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ThraP63058 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ThraP63058 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ThraP63058 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.16■□□□□ 0.02
ThraP63058 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.16■□□□□ 0.02
ThraP63058 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.15■□□□□ 0.02
ThraP63058 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ThraP63058 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ThraP63058 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.15■□□□□ 0.02
ThraP63058 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ThraP63058 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ThraP63058 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms