Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.69□□□□□ -0.06
Lhx1P63006 Mir6990-201ENSMUST00000183724 91 ntBASIC14.69□□□□□ -0.06
Lhx1P63006 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Lhx1P63006 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Lhx1P63006 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.69□□□□□ -0.06
Lhx1P63006 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx1P63006 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx1P63006 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.68□□□□□ -0.06
Lhx1P63006 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lhx1P63006 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lhx1P63006 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Gm14701-201ENSMUST00000117156 348 ntBASIC14.68□□□□□ -0.06
Lhx1P63006 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
Lhx1P63006 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx1P63006 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx1P63006 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Gm44335-201ENSMUST00000196879 141 ntBASIC14.68□□□□□ -0.06
Lhx1P63006 Gm44297-201ENSMUST00000198304 141 ntBASIC14.68□□□□□ -0.06
Lhx1P63006 Gm44346-201ENSMUST00000198851 141 ntBASIC14.68□□□□□ -0.06
Lhx1P63006 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx1P63006 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lhx1P63006 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx1P63006 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lhx1P63006 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Lhx1P63006 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Lhx1P63006 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lhx1P63006 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lhx1P63006 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.67□□□□□ -0.06
Lhx1P63006 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lhx1P63006 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Lhx1P63006 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Lhx1P63006 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx1P63006 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.67□□□□□ -0.06
Lhx1P63006 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.66□□□□□ -0.06
Lhx1P63006 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx1P63006 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx1P63006 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms