Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrch1P62046 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.57■□□□□ 0.4
Lrch1P62046 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lrch1P62046 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrch1P62046 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrch1P62046 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrch1P62046 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lrch1P62046 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lrch1P62046 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Lrch1P62046 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Gm5035-201ENSMUST00000215581 927 ntBASIC17.56■□□□□ 0.4
Lrch1P62046 Gm9229-201ENSMUST00000222777 126 ntBASIC17.56■□□□□ 0.4
Lrch1P62046 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.56■□□□□ 0.4
Lrch1P62046 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.56■□□□□ 0.4
Lrch1P62046 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrch1P62046 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrch1P62046 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Lrch1P62046 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrch1P62046 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.55■□□□□ 0.4
Lrch1P62046 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lrch1P62046 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.55■□□□□ 0.4
Lrch1P62046 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.55■□□□□ 0.4
Lrch1P62046 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.55■□□□□ 0.4
Lrch1P62046 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrch1P62046 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrch1P62046 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lrch1P62046 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrch1P62046 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Lrch1P62046 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.54■□□□□ 0.4
Lrch1P62046 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.54■□□□□ 0.4
Lrch1P62046 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrch1P62046 Mir6392-201ENSMUST00000184924 108 ntBASIC17.54■□□□□ 0.4
Lrch1P62046 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrch1P62046 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.53■□□□□ 0.4
Lrch1P62046 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lrch1P62046 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.53■□□□□ 0.4
Lrch1P62046 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms