Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm27989-201ENSMUST00000184721 107 ntBASIC12.07□□□□□ -0.48
Lmo4P61969 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.07□□□□□ -0.48
Lmo4P61969 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Lmo4P61969 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.07□□□□□ -0.48
Lmo4P61969 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.06□□□□□ -0.48
Lmo4P61969 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lmo4P61969 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lmo4P61969 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
Lmo4P61969 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm13464-201ENSMUST00000119418 935 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lmo4P61969 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.06□□□□□ -0.48
Lmo4P61969 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lmo4P61969 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.06□□□□□ -0.48
Lmo4P61969 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.05□□□□□ -0.48
Lmo4P61969 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.05□□□□□ -0.48
Lmo4P61969 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Lmo4P61969 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lmo4P61969 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lmo4P61969 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.05□□□□□ -0.48
Lmo4P61969 Gm12428-201ENSMUST00000119844 727 ntBASIC12.05□□□□□ -0.48
Lmo4P61969 Gm13823-201ENSMUST00000119930 345 ntBASIC12.05□□□□□ -0.48
Lmo4P61969 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.05□□□□□ -0.48
Lmo4P61969 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lmo4P61969 Mir6977-201ENSMUST00000184960 64 ntBASIC12.05□□□□□ -0.48
Lmo4P61969 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.05□□□□□ -0.48
Lmo4P61969 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.05□□□□□ -0.48
Lmo4P61969 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.05□□□□□ -0.48
Lmo4P61969 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lmo4P61969 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms