Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sec61a1P61620 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.21□□□□□ -0.29
Sec61a1P61620 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.21□□□□□ -0.29
Sec61a1P61620 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.21□□□□□ -0.29
Sec61a1P61620 Gm44771-201ENSMUST00000206975 626 ntBASIC13.21□□□□□ -0.29
Sec61a1P61620 Gm6296-201ENSMUST00000222599 943 ntBASIC13.21□□□□□ -0.29
Sec61a1P61620 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sec61a1P61620 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sec61a1P61620 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a1P61620 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.21□□□□□ -0.3
Sec61a1P61620 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.21□□□□□ -0.3
Sec61a1P61620 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.21□□□□□ -0.3
Sec61a1P61620 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a1P61620 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.2□□□□□ -0.3
Sec61a1P61620 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.2□□□□□ -0.3
Sec61a1P61620 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.2□□□□□ -0.3
Sec61a1P61620 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Rps4l-201ENSMUST00000071745 943 ntBASIC13.2□□□□□ -0.3
Sec61a1P61620 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a1P61620 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a1P61620 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a1P61620 Gm6376-201ENSMUST00000209407 580 ntBASIC13.19□□□□□ -0.3
Sec61a1P61620 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.19□□□□□ -0.3
Sec61a1P61620 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a1P61620 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms