Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.31□□□□□ -0.28
Sf3b6P59708 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.31□□□□□ -0.28
Sf3b6P59708 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.3□□□□□ -0.28
Sf3b6P59708 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.3□□□□□ -0.28
Sf3b6P59708 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Gm17807-201ENSMUST00000186869 298 ntBASIC13.3□□□□□ -0.28
Sf3b6P59708 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.3□□□□□ -0.28
Sf3b6P59708 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.3□□□□□ -0.28
Sf3b6P59708 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.3□□□□□ -0.28
Sf3b6P59708 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.3□□□□□ -0.28
Sf3b6P59708 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sf3b6P59708 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3b6P59708 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm8318-201ENSMUST00000182954 872 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Ank2-226ENSMUST00000189368 339 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.29□□□□□ -0.28
Sf3b6P59708 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms