Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nub1P54729 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.12■□□□□ 0.17
Nub1P54729 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nub1P54729 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nub1P54729 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nub1P54729 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.12■□□□□ 0.17
Nub1P54729 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Nub1P54729 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.11■□□□□ 0.17
Nub1P54729 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nub1P54729 Gm9727-201ENSMUST00000161387 555 ntBASIC16.11■□□□□ 0.17
Nub1P54729 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.11■□□□□ 0.17
Nub1P54729 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.11■□□□□ 0.17
Nub1P54729 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.11■□□□□ 0.17
Nub1P54729 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.11■□□□□ 0.17
Nub1P54729 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nub1P54729 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nub1P54729 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nub1P54729 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nub1P54729 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nub1P54729 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nub1P54729 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Nub1P54729 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nub1P54729 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nub1P54729 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.1■□□□□ 0.17
Nub1P54729 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nub1P54729 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Nub1P54729 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nub1P54729 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Nub1P54729 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.09■□□□□ 0.17
Nub1P54729 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Nub1P54729 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.09■□□□□ 0.17
Nub1P54729 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nub1P54729 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.09■□□□□ 0.17
Nub1P54729 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Nub1P54729 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nub1P54729 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nub1P54729 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nub1P54729 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nub1P54729 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nub1P54729 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
Nub1P54729 Sybu-209ENSMUST00000228639 4113 ntBASIC16.08■□□□□ 0.17
Nub1P54729 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nub1P54729 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Gm11779-201ENSMUST00000118541 368 ntBASIC16.08■□□□□ 0.16
Nub1P54729 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.08■□□□□ 0.16
Nub1P54729 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.08■□□□□ 0.16
Nub1P54729 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms