Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Atxn1P54254 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.88□□□□□ -0.03
Atxn1P54254 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Atxn1P54254 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
Atxn1P54254 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.87□□□□□ -0.03
Atxn1P54254 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Gm12008-201ENSMUST00000117791 755 ntBASIC14.87□□□□□ -0.03
Atxn1P54254 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.87□□□□□ -0.03
Atxn1P54254 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Gm16215-201ENSMUST00000161990 637 ntBASIC14.87□□□□□ -0.03
Atxn1P54254 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.87□□□□□ -0.03
Atxn1P54254 Gm6888-201ENSMUST00000221983 706 ntBASIC14.87□□□□□ -0.03
Atxn1P54254 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.87□□□□□ -0.03
Atxn1P54254 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Atxn1P54254 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atxn1P54254 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atxn1P54254 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.86□□□□□ -0.03
Atxn1P54254 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.86□□□□□ -0.03
Atxn1P54254 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.86□□□□□ -0.03
Atxn1P54254 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Atxn1P54254 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Atxn1P54254 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atxn1P54254 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atxn1P54254 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Atxn1P54254 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Atxn1P54254 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atxn1P54254 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms