Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.35□□□□□ -0.11
Sox3P53784 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Gm15427-201ENSMUST00000117288 531 ntBASIC14.35□□□□□ -0.11
Sox3P53784 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox3P53784 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.35□□□□□ -0.11
Sox3P53784 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Sox3P53784 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Gm27437-201ENSMUST00000183429 107 ntBASIC14.35□□□□□ -0.11
Sox3P53784 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox3P53784 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox3P53784 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.35□□□□□ -0.11
Sox3P53784 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sox3P53784 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox3P53784 Gm13597-201ENSMUST00000121239 375 ntBASIC14.34□□□□□ -0.11
Sox3P53784 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Sox3P53784 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.34□□□□□ -0.11
Sox3P53784 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Mir6990-201ENSMUST00000183724 91 ntBASIC14.34□□□□□ -0.11
Sox3P53784 Gm43474-201ENSMUST00000196415 774 ntBASIC14.34□□□□□ -0.11
Sox3P53784 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox3P53784 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox3P53784 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox3P53784 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sox3P53784 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox3P53784 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.33□□□□□ -0.12
Sox3P53784 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.33□□□□□ -0.12
Sox3P53784 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Gm22175-201ENSMUST00000175007 78 ntBASIC14.33□□□□□ -0.12
Sox3P53784 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox3P53784 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.33□□□□□ -0.12
Sox3P53784 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox3P53784 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox3P53784 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox3P53784 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms