Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 Gm5177-201ENSMUST00000183092 997 ntBASIC15.71■□□□□ 0.11
Rfx2P48379 Gm27494-201ENSMUST00000184735 189 ntBASIC15.71■□□□□ 0.11
Rfx2P48379 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.71■□□□□ 0.11
Rfx2P48379 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.71■□□□□ 0.11
Rfx2P48379 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.71■□□□□ 0.11
Rfx2P48379 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.71■□□□□ 0.11
Rfx2P48379 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rfx2P48379 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx2P48379 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfx2P48379 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfx2P48379 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rfx2P48379 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Gm15427-201ENSMUST00000117288 531 ntBASIC15.7■□□□□ 0.1
Rfx2P48379 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.7■□□□□ 0.1
Rfx2P48379 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Rfx2P48379 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfx2P48379 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.7■□□□□ 0.1
Rfx2P48379 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.7■□□□□ 0.1
Rfx2P48379 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Rfx2P48379 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
Rfx2P48379 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx2P48379 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rfx2P48379 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx2P48379 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Rfx2P48379 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rfx2P48379 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.69■□□□□ 0.1
Rfx2P48379 Thap2-203ENSMUST00000218989 527 ntBASIC15.69■□□□□ 0.1
Rfx2P48379 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.69■□□□□ 0.1
Rfx2P48379 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx2P48379 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx2P48379 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.69■□□□□ 0.1
Rfx2P48379 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rfx2P48379 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Rfx2P48379 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx2P48379 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx2P48379 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rfx2P48379 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.68■□□□□ 0.1
Rfx2P48379 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfx2P48379 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Gm14701-201ENSMUST00000117156 348 ntBASIC15.68■□□□□ 0.1
Rfx2P48379 Gm15920-201ENSMUST00000118998 402 ntBASIC15.68■□□□□ 0.1
Rfx2P48379 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.68■□□□□ 0.1
Rfx2P48379 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx2P48379 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Gm45747-201ENSMUST00000212203 999 ntBASIC15.68■□□□□ 0.1
Rfx2P48379 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx2P48379 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms