Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf4P43488 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Tnfsf4P43488 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm11780-201ENSMUST00000136880 516 ntBASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm17807-201ENSMUST00000186869 298 ntBASIC14.48□□□□□ -0.09
Tnfsf4P43488 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Tnfsf4P43488 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.47□□□□□ -0.09
Tnfsf4P43488 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.47□□□□□ -0.09
Tnfsf4P43488 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.47□□□□□ -0.09
Tnfsf4P43488 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Carlr-201ENSMUST00000181515 2574 ntBASIC14.47□□□□□ -0.09
Tnfsf4P43488 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf4P43488 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.46□□□□□ -0.09
Tnfsf4P43488 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.46□□□□□ -0.09
Tnfsf4P43488 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.46□□□□□ -0.09
Tnfsf4P43488 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf4P43488 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf4P43488 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms