Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col18a1P39061 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.58■□□□□ 0.72
Col18a1P39061 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col18a1P39061 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.58■□□□□ 0.72
Col18a1P39061 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.58■□□□□ 0.72
Col18a1P39061 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col18a1P39061 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col18a1P39061 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm12416-201ENSMUST00000120911 1008 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm19184-201ENSMUST00000196798 928 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Gm18056-201ENSMUST00000207670 568 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Gm18061-201ENSMUST00000208350 562 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Gm18063-201ENSMUST00000208529 568 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Gm18052-201ENSMUST00000208750 559 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC19.57■□□□□ 0.72
Col18a1P39061 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Col18a1P39061 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC19.57■□□□□ 0.72
Col18a1P39061 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col18a1P39061 Gm17383-201ENSMUST00000078739 1041 ntBASIC19.57■□□□□ 0.72
Col18a1P39061 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.56■□□□□ 0.72
Col18a1P39061 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.56■□□□□ 0.72
Col18a1P39061 Gm7584-201ENSMUST00000175829 940 ntBASIC19.56■□□□□ 0.72
Col18a1P39061 Gm5276-201ENSMUST00000196683 1047 ntBASIC19.56■□□□□ 0.72
Col18a1P39061 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col18a1P39061 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Gm4857-201ENSMUST00000192718 785 ntBASIC19.55■□□□□ 0.72
Col18a1P39061 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col18a1P39061 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col18a1P39061 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col18a1P39061 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Col18a1P39061 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col18a1P39061 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC19.55■□□□□ 0.72
Col18a1P39061 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC19.55■□□□□ 0.72
Col18a1P39061 Gm40466-201ENSMUST00000212174 422 ntBASIC19.55■□□□□ 0.72
Col18a1P39061 Gm45930-201ENSMUST00000221330 292 ntBASIC19.55■□□□□ 0.72
Col18a1P39061 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col18a1P39061 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col18a1P39061 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC19.54■□□□□ 0.72
Col18a1P39061 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col18a1P39061 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col18a1P39061 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col18a1P39061 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col18a1P39061 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Col18a1P39061 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC19.53■□□□□ 0.72
Col18a1P39061 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col18a1P39061 Gm43094-201ENSMUST00000196549 921 ntBASIC19.53■□□□□ 0.72
Col18a1P39061 Gm3961-201ENSMUST00000204425 994 ntBASIC19.53■□□□□ 0.72
Col18a1P39061 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms