Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cdh4P39038 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.34□□□□□ -0.11
Cdh4P39038 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.34□□□□□ -0.11
Cdh4P39038 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh4P39038 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh4P39038 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh4P39038 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cdh4P39038 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Cdh4P39038 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh4P39038 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
Cdh4P39038 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh4P39038 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Cdh4P39038 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.33□□□□□ -0.12
Cdh4P39038 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.33□□□□□ -0.12
Cdh4P39038 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cdh4P39038 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh4P39038 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh4P39038 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh4P39038 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdh4P39038 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Celf4-206ENSMUST00000224553 1729 ntBASIC14.32□□□□□ -0.12
Cdh4P39038 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Cdh4P39038 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh4P39038 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdh4P39038 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh4P39038 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.32□□□□□ -0.12
Cdh4P39038 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdh4P39038 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.32□□□□□ -0.12
Cdh4P39038 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh4P39038 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms