Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mir6956-201ENSMUST00000183598 62 ntBASIC14.04□□□□□ -0.16
RetP35546 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.04□□□□□ -0.16
RetP35546 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Gm37153-201ENSMUST00000193637 231 ntBASIC14.04□□□□□ -0.16
RetP35546 Gm45167-201ENSMUST00000208007 322 ntBASIC14.04□□□□□ -0.16
RetP35546 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.04□□□□□ -0.16
RetP35546 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RetP35546 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Sybu-209ENSMUST00000228639 4113 ntBASIC14.03□□□□□ -0.16
RetP35546 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RetP35546 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.03□□□□□ -0.16
RetP35546 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.03□□□□□ -0.16
RetP35546 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.03□□□□□ -0.16
RetP35546 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RetP35546 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RetP35546 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RetP35546 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
RetP35546 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.02□□□□□ -0.16
RetP35546 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RetP35546 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
RetP35546 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.02□□□□□ -0.17
RetP35546 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.02□□□□□ -0.17
RetP35546 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Gm27300-201ENSMUST00000184085 97 ntBASIC14.02□□□□□ -0.17
RetP35546 Gm27335-201ENSMUST00000184758 97 ntBASIC14.02□□□□□ -0.17
RetP35546 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.02□□□□□ -0.17
RetP35546 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.02□□□□□ -0.17
RetP35546 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RetP35546 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.02□□□□□ -0.17
RetP35546 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RetP35546 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms