Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Thbs1P35441 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Thbs1P35441 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.84□□□□□ -0.19
Thbs1P35441 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Gm45167-201ENSMUST00000208007 322 ntBASIC13.84□□□□□ -0.19
Thbs1P35441 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.84□□□□□ -0.19
Thbs1P35441 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Thbs1P35441 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Thbs1P35441 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Thbs1P35441 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Thbs1P35441 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.83□□□□□ -0.19
Thbs1P35441 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Thbs1P35441 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Thbs1P35441 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Thbs1P35441 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Thbs1P35441 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.83□□□□□ -0.2
Thbs1P35441 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.83□□□□□ -0.2
Thbs1P35441 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 Gm2651-201ENSMUST00000203560 838 ntBASIC13.83□□□□□ -0.2
Thbs1P35441 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.83□□□□□ -0.2
Thbs1P35441 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.83□□□□□ -0.2
Thbs1P35441 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.83□□□□□ -0.2
Thbs1P35441 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.83□□□□□ -0.2
Thbs1P35441 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Thbs1P35441 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Thbs1P35441 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.82□□□□□ -0.2
Thbs1P35441 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Thbs1P35441 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.82□□□□□ -0.2
Thbs1P35441 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.82□□□□□ -0.2
Thbs1P35441 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.82□□□□□ -0.2
Thbs1P35441 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.82□□□□□ -0.2
Thbs1P35441 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.82□□□□□ -0.2
Thbs1P35441 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Thbs1P35441 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Thbs1P35441 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Thbs1P35441 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms