Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PdgfbP31240 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PdgfbP31240 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.91□□□□□ -0.02
PdgfbP31240 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.91□□□□□ -0.02
PdgfbP31240 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.91□□□□□ -0.02
PdgfbP31240 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.91□□□□□ -0.02
PdgfbP31240 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdgfbP31240 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.9□□□□□ -0.02
PdgfbP31240 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PdgfbP31240 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.9□□□□□ -0.02
PdgfbP31240 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.9□□□□□ -0.02
PdgfbP31240 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PdgfbP31240 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PdgfbP31240 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.9□□□□□ -0.02
PdgfbP31240 Gm9229-201ENSMUST00000222777 126 ntBASIC14.9□□□□□ -0.02
PdgfbP31240 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.9□□□□□ -0.02
PdgfbP31240 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.9□□□□□ -0.02
PdgfbP31240 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdgfbP31240 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.9□□□□□ -0.02
PdgfbP31240 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.89□□□□□ -0.03
PdgfbP31240 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.89□□□□□ -0.03
PdgfbP31240 Gm45453-201ENSMUST00000211758 853 ntBASIC14.89□□□□□ -0.03
PdgfbP31240 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.89□□□□□ -0.03
PdgfbP31240 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.89□□□□□ -0.03
PdgfbP31240 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PdgfbP31240 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PdgfbP31240 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdgfbP31240 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PdgfbP31240 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PdgfbP31240 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.88□□□□□ -0.03
PdgfbP31240 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PdgfbP31240 Gm27892-201ENSMUST00000185017 106 ntBASIC14.88□□□□□ -0.03
PdgfbP31240 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.88□□□□□ -0.03
PdgfbP31240 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.88□□□□□ -0.03
PdgfbP31240 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdgfbP31240 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.88□□□□□ -0.03
PdgfbP31240 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.88□□□□□ -0.03
PdgfbP31240 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms