Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.15■□□□□ 0.34
Vcam1P29533 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.15■□□□□ 0.34
Vcam1P29533 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Gm2423-201ENSMUST00000074863 733 ntBASIC17.15■□□□□ 0.34
Vcam1P29533 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Vcam1P29533 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vcam1P29533 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vcam1P29533 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Vcam1P29533 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vcam1P29533 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vcam1P29533 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Vcam1P29533 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.14■□□□□ 0.33
Vcam1P29533 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.14■□□□□ 0.33
Vcam1P29533 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.14■□□□□ 0.33
Vcam1P29533 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.14■□□□□ 0.33
Vcam1P29533 Olfr286-202ENSMUST00000205305 969 ntBASIC17.14■□□□□ 0.33
Vcam1P29533 Shd-206ENSMUST00000225145 998 ntBASIC17.14■□□□□ 0.33
Vcam1P29533 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vcam1P29533 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Vcam1P29533 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcam1P29533 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vcam1P29533 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.13■□□□□ 0.33
Vcam1P29533 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vcam1P29533 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.13■□□□□ 0.33
Vcam1P29533 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm37230-201ENSMUST00000194491 818 ntBASIC17.13■□□□□ 0.33
Vcam1P29533 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.13■□□□□ 0.33
Vcam1P29533 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.13■□□□□ 0.33
Vcam1P29533 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vcam1P29533 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.13■□□□□ 0.33
Vcam1P29533 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcam1P29533 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vcam1P29533 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Vcam1P29533 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vcam1P29533 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Gm14719-201ENSMUST00000121891 340 ntBASIC17.12■□□□□ 0.33
Vcam1P29533 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.12■□□□□ 0.33
Vcam1P29533 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.12■□□□□ 0.33
Vcam1P29533 Gm5866-201ENSMUST00000177881 973 ntBASIC17.12■□□□□ 0.33
Vcam1P29533 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms