Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.51□□□□□ -0.41
Col8a2P25318 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.51□□□□□ -0.41
Col8a2P25318 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.51□□□□□ -0.41
Col8a2P25318 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.51□□□□□ -0.41
Col8a2P25318 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Col8a2P25318 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Col8a2P25318 Gm27494-201ENSMUST00000184735 189 ntBASIC12.5□□□□□ -0.41
Col8a2P25318 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col8a2P25318 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.5□□□□□ -0.41
Col8a2P25318 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.5□□□□□ -0.41
Col8a2P25318 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.5□□□□□ -0.41
Col8a2P25318 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.5□□□□□ -0.41
Col8a2P25318 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.5□□□□□ -0.41
Col8a2P25318 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col8a2P25318 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a2P25318 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col8a2P25318 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col8a2P25318 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col8a2P25318 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col8a2P25318 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.49□□□□□ -0.41
Col8a2P25318 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm14701-201ENSMUST00000117156 348 ntBASIC12.49□□□□□ -0.41
Col8a2P25318 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.49□□□□□ -0.41
Col8a2P25318 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
Col8a2P25318 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Gm45612-201ENSMUST00000211320 160 ntBASIC12.49□□□□□ -0.41
Col8a2P25318 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Col8a2P25318 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col8a2P25318 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.49□□□□□ -0.41
Col8a2P25318 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms