Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.35■□□□□ 0.05
Rb1P13405 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rb1P13405 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rb1P13405 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rb1P13405 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rb1P13405 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.34■□□□□ 0.05
Rb1P13405 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rb1P13405 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rb1P13405 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.34■□□□□ 0.05
Rb1P13405 Gm27494-201ENSMUST00000184735 189 ntBASIC15.34■□□□□ 0.05
Rb1P13405 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.34■□□□□ 0.05
Rb1P13405 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rb1P13405 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rb1P13405 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rb1P13405 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rb1P13405 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rb1P13405 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.33■□□□□ 0.05
Rb1P13405 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Rb1P13405 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rb1P13405 Sybu-209ENSMUST00000228639 4113 ntBASIC15.33■□□□□ 0.04
Rb1P13405 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.33■□□□□ 0.04
Rb1P13405 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rb1P13405 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.33■□□□□ 0.04
Rb1P13405 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.33■□□□□ 0.04
Rb1P13405 Gm9682-201ENSMUST00000197505 556 ntBASIC15.33■□□□□ 0.04
Rb1P13405 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.33■□□□□ 0.04
Rb1P13405 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rb1P13405 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rb1P13405 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rb1P13405 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Rb1P13405 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.33■□□□□ 0.04
Rb1P13405 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rb1P13405 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rb1P13405 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rb1P13405 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.32■□□□□ 0.04
Rb1P13405 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rb1P13405 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.32■□□□□ 0.04
Rb1P13405 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm19164-201ENSMUST00000210667 640 ntBASIC15.32■□□□□ 0.04
Rb1P13405 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rb1P13405 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rb1P13405 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rb1P13405 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms