Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.54■□□□□ 0.24
Hoxc6P10629 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.54■□□□□ 0.24
Hoxc6P10629 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.53■□□□□ 0.24
Hoxc6P10629 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm15653-201ENSMUST00000119247 907 ntBASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm14928-201ENSMUST00000120198 477 ntBASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.53■□□□□ 0.24
Hoxc6P10629 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm6218-201ENSMUST00000219812 628 ntBASIC16.53■□□□□ 0.24
Hoxc6P10629 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.53■□□□□ 0.24
Hoxc6P10629 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Hoxc6P10629 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxc6P10629 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hoxc6P10629 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hoxc6P10629 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Gm18187-201ENSMUST00000196476 984 ntBASIC16.52■□□□□ 0.24
Hoxc6P10629 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.52■□□□□ 0.24
Hoxc6P10629 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxc6P10629 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hoxc6P10629 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Hoxc6P10629 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.52■□□□□ 0.23
Hoxc6P10629 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.52■□□□□ 0.23
Hoxc6P10629 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxc6P10629 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.51■□□□□ 0.23
Hoxc6P10629 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxc6P10629 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.51■□□□□ 0.23
Hoxc6P10629 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm43703-201ENSMUST00000200523 763 ntBASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.51■□□□□ 0.23
Hoxc6P10629 Gm16476-201ENSMUST00000221544 139 ntBASIC16.51■□□□□ 0.23
Hoxc6P10629 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.51■□□□□ 0.23
Hoxc6P10629 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc6P10629 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms