Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm9727-201ENSMUST00000161387 555 ntBASIC13.01□□□□□ -0.33
PtcraP0C6B2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.01□□□□□ -0.33
PtcraP0C6B2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.01□□□□□ -0.33
PtcraP0C6B2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13□□□□□ -0.33
PtcraP0C6B2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13□□□□□ -0.33
PtcraP0C6B2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13□□□□□ -0.33
PtcraP0C6B2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PtcraP0C6B2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Thap2-203ENSMUST00000218989 527 ntBASIC13□□□□□ -0.33
PtcraP0C6B2 AC159295.1-201ENSMUST00000225326 940 ntBASIC13□□□□□ -0.33
PtcraP0C6B2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PtcraP0C6B2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13□□□□□ -0.33
PtcraP0C6B2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
PtcraP0C6B2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PtcraP0C6B2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13□□□□□ -0.33
PtcraP0C6B2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.99□□□□□ -0.33
PtcraP0C6B2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Mir8117-201ENSMUST00000184773 107 ntBASIC12.99□□□□□ -0.33
PtcraP0C6B2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.99□□□□□ -0.33
PtcraP0C6B2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PtcraP0C6B2 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.98□□□□□ -0.33
PtcraP0C6B2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PtcraP0C6B2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms