Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Pax1P09084 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pax1P09084 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Pax1P09084 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pax1P09084 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.2□□□□□ -0.46
Pax1P09084 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pax1P09084 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pax1P09084 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pax1P09084 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Gm15626-201ENSMUST00000117478 868 ntBASIC12.19□□□□□ -0.46
Pax1P09084 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.19□□□□□ -0.46
Pax1P09084 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.19□□□□□ -0.46
Pax1P09084 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.19□□□□□ -0.46
Pax1P09084 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pax1P09084 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.19□□□□□ -0.46
Pax1P09084 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.19□□□□□ -0.46
Pax1P09084 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pax1P09084 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.19□□□□□ -0.46
Pax1P09084 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pax1P09084 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.18□□□□□ -0.46
Pax1P09084 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pax1P09084 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pax1P09084 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 Gm13312-201ENSMUST00000119631 718 ntBASIC12.18□□□□□ -0.46
Pax1P09084 Gm15794-201ENSMUST00000120182 631 ntBASIC12.18□□□□□ -0.46
Pax1P09084 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pax1P09084 AA414768-201ENSMUST00000121924 1257 ntBASIC12.18□□□□□ -0.46
Pax1P09084 Gm6659-201ENSMUST00000174752 547 ntBASIC12.18□□□□□ -0.46
Pax1P09084 Gm45328-201ENSMUST00000210942 917 ntBASIC12.18□□□□□ -0.46
Pax1P09084 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms