Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04224 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
P04224 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.18□□□□□ -0.3
P04224 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P04224 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Gm11355-201ENSMUST00000121120 306 ntBASIC13.18□□□□□ -0.3
P04224 Gm22697-201ENSMUST00000175194 63 ntBASIC13.18□□□□□ -0.3
P04224 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Gm18101-201ENSMUST00000215769 548 ntBASIC13.18□□□□□ -0.3
P04224 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.18□□□□□ -0.3
P04224 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
P04224 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04224 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P04224 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
P04224 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.17□□□□□ -0.3
P04224 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04224 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.17□□□□□ -0.3
P04224 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.17□□□□□ -0.3
P04224 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04224 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P04224 Efs-202ENSMUST00000227037 2540 ntBASIC13.16□□□□□ -0.3
P04224 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
P04224 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
P04224 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
P04224 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P04224 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
P04224 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.16□□□□□ -0.3
P04224 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P04224 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.16□□□□□ -0.3
P04224 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P04224 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04224 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04224 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms