Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.18■□□□□ 0.5
Col4a1P02463 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col4a1P02463 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col4a1P02463 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
Col4a1P02463 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.18■□□□□ 0.5
Col4a1P02463 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.18■□□□□ 0.5
Col4a1P02463 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.18■□□□□ 0.5
Col4a1P02463 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a1P02463 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col4a1P02463 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col4a1P02463 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Col4a1P02463 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.17■□□□□ 0.5
Col4a1P02463 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.17■□□□□ 0.5
Col4a1P02463 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col4a1P02463 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col4a1P02463 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a1P02463 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.16■□□□□ 0.5
Col4a1P02463 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.16■□□□□ 0.5
Col4a1P02463 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.16■□□□□ 0.5
Col4a1P02463 Gm6916-202ENSMUST00000205523 195 ntBASIC18.16■□□□□ 0.5
Col4a1P02463 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col4a1P02463 Gm45668-201ENSMUST00000211271 493 ntBASIC18.16■□□□□ 0.5
Col4a1P02463 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.16■□□□□ 0.5
Col4a1P02463 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.16■□□□□ 0.5
Col4a1P02463 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col4a1P02463 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col4a1P02463 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a1P02463 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.15■□□□□ 0.5
Col4a1P02463 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.15■□□□□ 0.5
Col4a1P02463 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.15■□□□□ 0.5
Col4a1P02463 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col4a1P02463 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.15■□□□□ 0.5
Col4a1P02463 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms