Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TcraP01849 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
TcraP01849 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TcraP01849 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TcraP01849 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.96□□□□□ -0.65
TcraP01849 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TcraP01849 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Gm13559-201ENSMUST00000120476 863 ntBASIC10.96□□□□□ -0.65
TcraP01849 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.96□□□□□ -0.65
TcraP01849 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.96□□□□□ -0.65
TcraP01849 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TcraP01849 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TcraP01849 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
TcraP01849 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TcraP01849 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.95□□□□□ -0.66
TcraP01849 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TcraP01849 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm7889-201ENSMUST00000185591 958 ntBASIC10.95□□□□□ -0.66
TcraP01849 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.95□□□□□ -0.66
TcraP01849 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.95□□□□□ -0.66
TcraP01849 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.95□□□□□ -0.66
TcraP01849 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.95□□□□□ -0.66
TcraP01849 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.95□□□□□ -0.66
TcraP01849 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
TcraP01849 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.95□□□□□ -0.66
TcraP01849 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TcraP01849 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms