Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Hdac3O88895 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.43□□□□□ -0.26
Hdac3O88895 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Hdac3O88895 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm11780-201ENSMUST00000136880 516 ntBASIC13.43□□□□□ -0.26
Hdac3O88895 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm17971-201ENSMUST00000190239 806 ntBASIC13.43□□□□□ -0.26
Hdac3O88895 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.43□□□□□ -0.26
Hdac3O88895 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.43□□□□□ -0.26
Hdac3O88895 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hdac3O88895 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.43□□□□□ -0.26
Hdac3O88895 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.42□□□□□ -0.26
Hdac3O88895 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.42□□□□□ -0.26
Hdac3O88895 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Hdac3O88895 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.42□□□□□ -0.26
Hdac3O88895 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.42□□□□□ -0.26
Hdac3O88895 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.42□□□□□ -0.26
Hdac3O88895 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.42□□□□□ -0.26
Hdac3O88895 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Gm10819-201ENSMUST00000099988 561 ntBASIC13.42□□□□□ -0.26
Hdac3O88895 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hdac3O88895 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.42□□□□□ -0.26
Hdac3O88895 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdac3O88895 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
Hdac3O88895 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Gm24589-201ENSMUST00000116692 94 ntBASIC13.41□□□□□ -0.26
Hdac3O88895 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.41□□□□□ -0.26
Hdac3O88895 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.41□□□□□ -0.26
Hdac3O88895 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.41□□□□□ -0.26
Hdac3O88895 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.41□□□□□ -0.26
Hdac3O88895 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hdac3O88895 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdac3O88895 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms