Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Gm24589-201ENSMUST00000116692 94 ntBASIC10.62□□□□□ -0.71
Sh2d1aO88890 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.62□□□□□ -0.71
Sh2d1aO88890 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh2d1aO88890 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm13418-201ENSMUST00000119097 944 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm4535-201ENSMUST00000182274 558 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm27646-201ENSMUST00000183989 110 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44357-201ENSMUST00000195897 142 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm19658-201ENSMUST00000196231 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44367-201ENSMUST00000196836 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44350-201ENSMUST00000197197 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44390-201ENSMUST00000197533 144 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44313-201ENSMUST00000198018 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44486-201ENSMUST00000198508 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44314-201ENSMUST00000199263 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44394-201ENSMUST00000199558 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44484-201ENSMUST00000199873 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44466-201ENSMUST00000200264 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm44359-201ENSMUST00000200671 138 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Gm34391-201ENSMUST00000203706 907 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.61□□□□□ -0.71
Sh2d1aO88890 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.61□□□□□ -0.71
Sh2d1aO88890 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sh2d1aO88890 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms