Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Best1O88870 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.37□□□□□ -0.11
Best1O88870 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Best1O88870 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.36□□□□□ -0.11
Best1O88870 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Best1O88870 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.36□□□□□ -0.11
Best1O88870 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Best1O88870 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.36□□□□□ -0.11
Best1O88870 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.36□□□□□ -0.11
Best1O88870 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.36□□□□□ -0.11
Best1O88870 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.36□□□□□ -0.11
Best1O88870 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Best1O88870 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Best1O88870 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Best1O88870 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Best1O88870 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Best1O88870 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Best1O88870 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.35□□□□□ -0.11
Best1O88870 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.35□□□□□ -0.11
Best1O88870 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Best1O88870 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.35□□□□□ -0.11
Best1O88870 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.35□□□□□ -0.11
Best1O88870 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Best1O88870 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Best1O88870 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Best1O88870 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.34□□□□□ -0.11
Best1O88870 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Gm22175-201ENSMUST00000175007 78 ntBASIC14.34□□□□□ -0.11
Best1O88870 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.34□□□□□ -0.11
Best1O88870 Gm2451-201ENSMUST00000199447 999 ntBASIC14.34□□□□□ -0.11
Best1O88870 Gm10290-201ENSMUST00000200451 999 ntBASIC14.34□□□□□ -0.11
Best1O88870 Gm45098-201ENSMUST00000207179 657 ntBASIC14.34□□□□□ -0.11
Best1O88870 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.34□□□□□ -0.11
Best1O88870 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Best1O88870 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.34□□□□□ -0.11
Best1O88870 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Best1O88870 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms