Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cops6O88545 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops6O88545 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops6O88545 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.22■□□□□ 0.51
Cops6O88545 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.22■□□□□ 0.51
Cops6O88545 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
Cops6O88545 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.22■□□□□ 0.51
Cops6O88545 Gm27533-201ENSMUST00000183800 152 ntBASIC18.22■□□□□ 0.51
Cops6O88545 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.22■□□□□ 0.51
Cops6O88545 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.22■□□□□ 0.51
Cops6O88545 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops6O88545 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cops6O88545 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cops6O88545 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cops6O88545 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cops6O88545 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cops6O88545 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cops6O88545 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cops6O88545 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Cops6O88545 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.2■□□□□ 0.5
Cops6O88545 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.2■□□□□ 0.5
Cops6O88545 Gm13464-201ENSMUST00000119418 935 ntBASIC18.2■□□□□ 0.5
Cops6O88545 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.2■□□□□ 0.5
Cops6O88545 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Cops6O88545 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Gm9063-201ENSMUST00000223299 582 ntBASIC18.2■□□□□ 0.5
Cops6O88545 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cops6O88545 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.2■□□□□ 0.5
Cops6O88545 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cops6O88545 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cops6O88545 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.2■□□□□ 0.5
Cops6O88545 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cops6O88545 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops6O88545 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.19■□□□□ 0.5
Cops6O88545 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops6O88545 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Gm5566-201ENSMUST00000116118 459 ntBASIC18.19■□□□□ 0.5
Cops6O88545 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops6O88545 Mir7684-201ENSMUST00000183858 60 ntBASIC18.19■□□□□ 0.5
Cops6O88545 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.19■□□□□ 0.5
Cops6O88545 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cops6O88545 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops6O88545 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.18■□□□□ 0.5
Cops6O88545 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.18■□□□□ 0.5
Cops6O88545 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cops6O88545 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.18■□□□□ 0.5
Cops6O88545 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.18■□□□□ 0.5
Cops6O88545 Gm14767-201ENSMUST00000121559 586 ntBASIC18.18■□□□□ 0.5
Cops6O88545 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms