Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cops4O88544 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cops4O88544 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cops4O88544 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.85□□□□□ -0.19
Cops4O88544 Gm6659-201ENSMUST00000174752 547 ntBASIC13.85□□□□□ -0.19
Cops4O88544 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.85□□□□□ -0.19
Cops4O88544 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cops4O88544 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cops4O88544 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Cops4O88544 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.84□□□□□ -0.19
Cops4O88544 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Gm14722-201ENSMUST00000118943 689 ntBASIC13.84□□□□□ -0.19
Cops4O88544 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cops4O88544 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.84□□□□□ -0.19
Cops4O88544 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cops4O88544 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops4O88544 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops4O88544 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops4O88544 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops4O88544 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cops4O88544 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops4O88544 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops4O88544 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.83□□□□□ -0.2
Cops4O88544 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops4O88544 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.83□□□□□ -0.2
Cops4O88544 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.83□□□□□ -0.2
Cops4O88544 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops4O88544 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms