Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Cops3O88543 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cops3O88543 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Cops3O88543 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.44□□□□□ -0.26
Cops3O88543 Gm8318-201ENSMUST00000182954 872 ntBASIC13.44□□□□□ -0.26
Cops3O88543 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.44□□□□□ -0.26
Cops3O88543 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.44□□□□□ -0.26
Cops3O88543 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.44□□□□□ -0.26
Cops3O88543 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.44□□□□□ -0.26
Cops3O88543 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops3O88543 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops3O88543 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.43□□□□□ -0.26
Cops3O88543 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Gm12134-201ENSMUST00000122109 520 ntBASIC13.43□□□□□ -0.26
Cops3O88543 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.43□□□□□ -0.26
Cops3O88543 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Gm8655-201ENSMUST00000221159 852 ntBASIC13.43□□□□□ -0.26
Cops3O88543 Celf4-206ENSMUST00000224553 1729 ntBASIC13.43□□□□□ -0.26
Cops3O88543 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.43□□□□□ -0.26
Cops3O88543 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops3O88543 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cops3O88543 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms