Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.54□□□□□ -0.4
Pfdn2O70591 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm10566-201ENSMUST00000086739 996 ntBASIC12.54□□□□□ -0.4
Pfdn2O70591 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.54□□□□□ -0.4
Pfdn2O70591 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.54□□□□□ -0.4
Pfdn2O70591 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Pfdn2O70591 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn2O70591 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.53□□□□□ -0.4
Pfdn2O70591 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Gm22697-201ENSMUST00000175194 63 ntBASIC12.53□□□□□ -0.4
Pfdn2O70591 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Gm7889-201ENSMUST00000185591 958 ntBASIC12.53□□□□□ -0.4
Pfdn2O70591 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.53□□□□□ -0.4
Pfdn2O70591 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Carlr-201ENSMUST00000181515 2574 ntBASIC12.53□□□□□ -0.4
Pfdn2O70591 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn2O70591 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn2O70591 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.52□□□□□ -0.4
Pfdn2O70591 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.52□□□□□ -0.4
Pfdn2O70591 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn2O70591 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Pfdn2O70591 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Pfdn2O70591 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.52□□□□□ -0.41
Pfdn2O70591 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Gm44430-201ENSMUST00000203376 995 ntBASIC12.52□□□□□ -0.41
Pfdn2O70591 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn2O70591 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms