Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.84□□□□□ -0.51
Pde6dO55057 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pde6dO55057 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pde6dO55057 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pde6dO55057 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.83□□□□□ -0.52
Pde6dO55057 Gm37856-201ENSMUST00000191634 999 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.83□□□□□ -0.52
Pde6dO55057 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
Pde6dO55057 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pde6dO55057 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pde6dO55057 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pde6dO55057 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.82□□□□□ -0.52
Pde6dO55057 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.82□□□□□ -0.52
Pde6dO55057 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.82□□□□□ -0.52
Pde6dO55057 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pde6dO55057 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pde6dO55057 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.81□□□□□ -0.52
Pde6dO55057 Gm37179-201ENSMUST00000194862 823 ntBASIC11.81□□□□□ -0.52
Pde6dO55057 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.81□□□□□ -0.52
Pde6dO55057 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pde6dO55057 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pde6dO55057 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pde6dO55057 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms