Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sptlc1O35704 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sptlc1O35704 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Gm6415-201ENSMUST00000118488 348 ntBASIC16.42■□□□□ 0.22
Sptlc1O35704 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Sptlc1O35704 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.42■□□□□ 0.22
Sptlc1O35704 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.42■□□□□ 0.22
Sptlc1O35704 AC114573.1-201ENSMUST00000224120 1210 ntBASIC16.42■□□□□ 0.22
Sptlc1O35704 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Sptlc1O35704 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sptlc1O35704 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sptlc1O35704 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Dancr-204ENSMUST00000132389 2347 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm13015-201ENSMUST00000118674 204 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm27920-201ENSMUST00000183953 96 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm29541-201ENSMUST00000191351 678 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm38294-201ENSMUST00000192831 381 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.41■□□□□ 0.22
Sptlc1O35704 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sptlc1O35704 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sptlc1O35704 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC16.4■□□□□ 0.22
Sptlc1O35704 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm9824-201ENSMUST00000178707 561 ntBASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm38114-201ENSMUST00000191877 1232 ntBASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.4■□□□□ 0.22
Sptlc1O35704 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sptlc1O35704 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sptlc1O35704 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sptlc1O35704 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sptlc1O35704 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sptlc1O35704 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms