Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.1■□□□□ 0.01
Phox2bO35690 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.1■□□□□ 0.01
Phox2bO35690 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Phox2bO35690 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Phox2bO35690 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Phox2bO35690 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.09■□□□□ 0.01
Phox2bO35690 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.09■□□□□ 0.01
Phox2bO35690 AC124408.1-201ENSMUST00000228938 707 ntBASIC15.09■□□□□ 0.01
Phox2bO35690 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.09■□□□□ 0.01
Phox2bO35690 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.09■□□□□ 0.01
Phox2bO35690 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Phox2bO35690 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Phox2bO35690 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.09■□□□□ 0.01
Phox2bO35690 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Phox2bO35690 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Phox2bO35690 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Phox2bO35690 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Phox2bO35690 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Gm15321-201ENSMUST00000121290 288 ntBASIC15.08■□□□□ 0
Phox2bO35690 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Phox2bO35690 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.08■□□□□ 0
Phox2bO35690 Gm27838-201ENSMUST00000184829 128 ntBASIC15.08■□□□□ 0
Phox2bO35690 Gm18827-201ENSMUST00000188341 790 ntBASIC15.08■□□□□ 0
Phox2bO35690 Gm45331-201ENSMUST00000209868 554 ntBASIC15.08■□□□□ 0
Phox2bO35690 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.08■□□□□ 0
Phox2bO35690 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Phox2bO35690 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Phox2bO35690 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Phox2bO35690 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.07■□□□□ 0
Phox2bO35690 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Gm12091-201ENSMUST00000146791 830 ntBASIC15.07■□□□□ 0
Phox2bO35690 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.07■□□□□ 0
Phox2bO35690 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.07■□□□□ 0
Phox2bO35690 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms