Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.68□□□□□ -0.38
Prrt1O35449 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Carlr-201ENSMUST00000181515 2574 ntBASIC12.68□□□□□ -0.38
Prrt1O35449 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Mir5130-201ENSMUST00000175160 84 ntBASIC12.68□□□□□ -0.38
Prrt1O35449 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.68□□□□□ -0.38
Prrt1O35449 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.68□□□□□ -0.38
Prrt1O35449 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prrt1O35449 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Prrt1O35449 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prrt1O35449 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prrt1O35449 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.67□□□□□ -0.38
Prrt1O35449 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.67□□□□□ -0.38
Prrt1O35449 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prrt1O35449 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.67□□□□□ -0.38
Prrt1O35449 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.67□□□□□ -0.38
Prrt1O35449 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prrt1O35449 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.67□□□□□ -0.38
Prrt1O35449 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.67□□□□□ -0.38
Prrt1O35449 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.67□□□□□ -0.38
Prrt1O35449 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.67□□□□□ -0.38
Prrt1O35449 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prrt1O35449 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.67□□□□□ -0.38
Prrt1O35449 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.66□□□□□ -0.38
Prrt1O35449 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prrt1O35449 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Prrt1O35449 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prrt1O35449 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Prrt1O35449 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.66□□□□□ -0.38
Prrt1O35449 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm27011-201ENSMUST00000182352 972 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm8825-201ENSMUST00000182565 998 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm4518-201ENSMUST00000182638 718 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.66□□□□□ -0.38
Prrt1O35449 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms