Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf11O35235 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Tnfsf11O35235 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm12008-201ENSMUST00000117791 755 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm11355-201ENSMUST00000121120 306 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm18101-201ENSMUST00000215769 548 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.69□□□□□ -0.54
Tnfsf11O35235 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf11O35235 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfsf11O35235 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf11O35235 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.68□□□□□ -0.54
Tnfsf11O35235 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf11O35235 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Tnfsf11O35235 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms