Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Cpsf2O35218 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Ank2-226ENSMUST00000189368 339 ntBASIC16.04■□□□□ 0.16
Cpsf2O35218 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.04■□□□□ 0.16
Cpsf2O35218 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.04■□□□□ 0.16
Cpsf2O35218 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.04■□□□□ 0.16
Cpsf2O35218 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf2O35218 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cpsf2O35218 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.03■□□□□ 0.16
Cpsf2O35218 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Gm11780-201ENSMUST00000136880 516 ntBASIC16.03■□□□□ 0.16
Cpsf2O35218 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf2O35218 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf2O35218 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Celf4-206ENSMUST00000224553 1729 ntBASIC16.02■□□□□ 0.16
Cpsf2O35218 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.02■□□□□ 0.16
Cpsf2O35218 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.02■□□□□ 0.16
Cpsf2O35218 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Cpsf2O35218 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Cpsf2O35218 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.02■□□□□ 0.16
Cpsf2O35218 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Gm7977-201ENSMUST00000193787 748 ntBASIC16.02■□□□□ 0.16
Cpsf2O35218 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.02■□□□□ 0.16
Cpsf2O35218 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.02■□□□□ 0.16
Cpsf2O35218 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf2O35218 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.02■□□□□ 0.15
Cpsf2O35218 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms